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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939983.1_cds_XP_016484367.1_75389
CDS Infomation

[gene=LOC107804927] [db_xref=GeneID:107804927] [protein=omega-3 fatty acid desaturase, endoplasmic reticulum-like isoform X4] [protein_id=XP_016484367.1] [location=join(27339..27625,27709..27798,28166..28232,28308..28400,28505..28690,28899..28979,29064..29201,29320..29511)] [gbkey=CDS]
Sequence

ATGGGGTCTCTTGGATTGAATTATGAAAAGGGAAATGAAGAAATGGAATTGGAATTTGAT
CCAAGTGCACCACCTCCATTTAAGTTATCTGAAATTCGAGCTGCTATTCCTAAGCATTGT
TGGGTTAAAAATCCATGGAAATCACTAAGTTACGTTTTTAGAGATTTTACTATTGTTGCT
GCATTGGTTGCCATAGCCATTTTTTTGGATAGTTGGAAATTTTGGCCACTTTATTGGGTT
GCTCAGGGTACTATGTTTTGGGCAATCTTTGTTCTTGGACATGATTGTGGACATGGAAGC
TTTTCAGAGAGTGCATTTCTTAATAGTGTGGTTGGACACATTCTTCATTCTTCTATCCTT
GTACCCTATCATGGATGGAGAATCAGCCATAGAACTCACCATCAAAACCATGGAAATGTT
GAAGCTGATGAATCTTGGGTGCCGATGCCAGAAAAACTATATAAAGAACTGGATTTTGCT
ACCAAATTTTTTAGATTCAAGATTCCTTTTCCCTTGTTAGCATACCCTATGTACTTGATA
AGCAGAAGTCCAGGGAAAAAAGGTTCTCATTTTAATCCATATAGTGATTTGTTTCAACAT
CACGAGAGAAAATATGTCATAACATCAACATTATGCTGGACTGTTATGGTGGCTTTCCTC
TACTATCTTTATACTGTTATCGGCTCTCTTCAACTGTTTAAGCTTTATGGAATTCCTTAT
ATGATTTTTGTTATGTGGTTGGATTTTGTCACATATTTACACCACCATGGCCATGAGCAG
AATTTACCTTGGTACCGTGGCAAGGAGTGGAGTTATCTAAGAGGAGGATTAACAACAATT
GATAGAGATTATGGCTTGTTTAATAACATTCAACATGATATTGGCACCCATGTTATTCAC
CATCTTTTTCCTCAGATACCACATTATCACCTCGCCGAAGCGACTAAAGCGGCAAAGCCG
GTACTTGGGAAGTATTATAGGGAGCCAAAAAAATCAGGAATAATTCCATTTCATTTGATT
GGAAATTTAGTGTCAAGTATGAAGCAGGACCATTTTGTTAGTGACAATGGAGAAATTGTT
TACTATCAGACTGATCCACAACTGCTCAAATTATTTGGGAAAAAGGCTGAGTAA

Peptide Sequence

PEP ID

XP_016484367.1
PEP Infomation

PREDICTED: omega-3 fatty acid desaturase, endoplasmic reticulum-like isoform X4 [Nicotiana tabacum]
Sequence

MGSLGLNYEKGNEEMELEFDPSAPPPFKLSEIRAAIPKHCWVKNPWKSLSYVFRDFTIVA
ALVAIAIFLDSWKFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESAFLNSVVGHILHSSIL
VPYHGWRISHRTHHQNHGNVEADESWVPMPEKLYKELDFATKFFRFKIPFPLLAYPMYLI
SRSPGKKGSHFNPYSDLFQHHERKYVITSTLCWTVMVAFLYYLYTVIGSLQLFKLYGIPY
MIFVMWLDFVTYLHHHGHEQNLPWYRGKEWSYLRGGLTTIDRDYGLFNNIQHDIGTHVIH
HLFPQIPHYHLAEATKAAKPVLGKYYREPKKSGIIPFHLIGNLVSSMKQDHFVSDNGEIV
YYQTDPQLLKLFGKKAE

Transcript Sequence

Gene sequence data has not been registered.